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*Note: These
are Dr. Viola's recent publications
Site Specific Modulation Publications
·
D. M. Colleluori,
R. S. Reczknwski, F. A. Emig,
E. Cama, J. D. Cox, L. R. Scolnick,
K. Compher, K. Jude, S. Han, R. E. Viola, D. W.
Christianson, and D. E. Ash, Probing the Role of the Hyper-Reactive
Histidine Residue of Arginase, Arch. Biochem. Biophys. 444,
15-26 (2005).
· I. Elder, S.Han,
C. K. Tu, H. Steele, P. J. Laipis,
R. E. Viola, and D. N. Silverman, Activation of Carbonic Anhydrase II by Active-Site Incorporation of Histidine
Analogs, Arch. Biochem. Biophys.,
421, 283-289 (2004)
· K. M. Jude, S. K. Wright, C. K. Tu, D. N. Silverman, R. E. Viola, and D. W.
Christianson, Crystal Structure of F65A/Y131C-methylimidazole Carbonic Anhydrase V Reveals Architectural Features of an
Engineered Proton Shuttle, Biochemistry
41, 2485-2491 (2002).
· S. K. Wright and R. E. Viola, Alteration
of the Specificity of Malate Dehydrogenase by Chemical Modulation of an
Active Site Arginine, J. Biol. Chem.
276, 31151-31155 (2001).
· J. K. Bell, H. Yennawar,
S. K. Wright, R. E. Viola, and L. J. Banaszak,
Creating a Malate Dehydrogenase with a Modified Active Site, J. Biol. Chem. 276, 31156-31162 (2001).
· S. K. Wright, M. M. Kish, and R. E.
Viola, From Malate Dehydrogenase to Phenyllactate
Dehydrogenase: Incorporation of Unnatural Amino Acids to Generate an Improved
Enzyme-Catalyzed Activity, J. Biol.
Chem. 275, 31689-31694
(2000).
Aspartate Pathway Publications
· D. M. Coe and R. E. Viola,
Assessing the Roles of Catalytic Functional Groups in the Mechanism of
Homoserine Succinyltransferase, Arch. Biochem. Biophys. 461, 211-218 (2007).
· C. R. Faehnle, X.
Liu, A. Pavlovsky, and R. E. Viola, The Initial Step in the Archael
Aspartate Biosynthetic Pathway Catalyzed by a Monofunctional Aspartokinase,
Acta Cryst. F62, 962-966 (2006).
· S. Han, R. A. Moore, and R. E.
Viola, A Facile Synthesis of a Difluoromethylene
Analog of β-aspartylphosphate
as an Inhibitor of Aspartate-ß-semialdehyde dehydrogenase, SynLett. 845-846 (2003).
· R. A. Moore, W. A. Bocik, and R. E. Viola, Expression and Purification of
L-Aspartate-β-semialdehyde dehydrogenase from
Infectious Microorganisms, Prot.
Express. Purif. 25, 189-194 (2002).
· C. L. James and R. E. Viola,
Production and Characterization of Bifunctional Enzymes. Domain Swapping to
Produce New Bifunctional Enzymes in the Aspartate Pathway, Biochemistry 41, 3720-3725 (2002).
· C. L. James and R. E. Viola,
Production and Characterization of Bifunctional Enzymes. Substrate
Channeling in the Aspartate Pathway, Biochemistry
41, 3726-3731 (2002).
· J. Blanco and R. E. Viola, Purification,
crystallization and preliminary X-ray analysis of aspartokinase III from
Escherichia coli, Acta
Cryst. D58,
352-354 (2002).
· R. E. Viola, The Central Enzymes of
the Aspartate Pathway of Amino Acid Biosynthesis, Acc. Chem. Res. 34,
339-349 (2001).
ASA Dehydrogenase Structural Publications
·
R. E. Viola, X. Liu, J. F. Ohren, and
C. R. Faehnle, Structure of a redundant enzyme. The second isoform of Aspartate β-semialdehyde dehydrogenase from Vibrio cholerae, Acta. Cryst. D64, 321-330 (2008).
·
C. R. Faehnle, J. Le Coq, X. Liu, and
R. E. Viola, Structural Complexes of the Anti-bacterial Target Aspartate-β-semialdehyde Dehydrogenase
from Streptococcus pneumoniae, J. Biol.
Chem. 281, 31031-31040
(2006).
·
C. R. Faehnle, J. F. Ohren, and R. E.
Viola, A New Branch in the Family. Structure of
Aspartate β-semialdehyde
Dehydrogenase from Methanococcus jannaschii, J. Molec.
Biol. 353, 1055-1068 (2005).
· C. R. Faehnle, J. Blanco,
and R. E. Viola, Structural Basis for Discrimination Between Oxyanion Substrates or Inhibitors in Aspartate-β-semialdehyde
Dehydrogenase, Acta. Cryst. D60, 2320-2324 (2004).
·
J. Blanco, R. A. Moore, C. R. Faehnle,
and R. E. Viola, Critical Catalytic Functional Groups in the Mechanism of
Aspartate-β-semialdehyde
Dehydrogenase, Acta. Cryst. D60, 1808-1815 (2004).
·
J. Blanco, R. A. Moore, C. R. Faehnle,
D. M. Coe, and R. E. Viola, The Role of Substrate Binding Groups in the
Mechanism of Aspartate-β-semialdehyde
Dehydrogenase, Acta Cryst.
D60, 1388-1395 (2004).
·
J. Blanco, R. A. Moore, and R. E.
Viola, Capture of an Intermediate in the Catalytic Cycle of L-Aspartate-β-semialdehyde
Dehydrogenase, Proc. Natl. Acad. Sci. USA 100,
12613-12617 (2003).
· J. Blanco, R. A. Moore, V. Kabaleeswaram, and R. E. Viola, A structural basis for
the Mechanism of Aspartate-b-semialdehyde Dehydrogenase from Vibrio cholerae, Protein Sci.
12, 27-33 (2003).
· A. Hadfield,
C. Shammes, G. Kryger,
D. Ringe, G. Petsko, J.
Ouyang, and R. E. Viola, Active site analysis of
the potential anti-microbial target Aspartate semialdehyde dehydrogenase, Biochemistry 40, 14475-14483 (2001).
Aspartoacylase Publications
· J. Le Coq,
A. Pavlovsky, R. Malik, R. Sanishvili, C. Xu, and R. E. Viola, Examination of
the Mechanism of Human Brain Aspartoacylase through the Binding of an
Intermediate Analog, Biochemistry
47, 3484-3492 (2008).
·
R. E. Viola, The Impact of Structural Biology on Neurobiology, Proc. Natl. Acad. Sci.
USA 104, 399-400 (2007).
·
J. Le Coq, H.-J. An, C. Lebrilla, and R. E. Viola, Characterization
of Aspartoacylase: the Brain Enzyme Responsible for Canavan Disease, Biochemistry
45, 5878-5884 (2006).
· C. N. Madhavarao,
J. R. Moffett, R. A. Moore, R.E. Viola, M. A. A. Namboodiri,
and D. M. Jacobowitz, Immunohistochemical
Localization of Aspartoacylase in the Rat Central Nervous System, J. Compar. Neurol. 472,
318-329 (2004).
· R. A. Moore, J. Le Coq, C. R.
Faehnle, and R. E. Viola, Purification and Preliminary Characterization of
Brain Aspartoacylase, Arch. Biochem. Biophys. 413, 1-8 (2003).
Miscellaneous Publications
· R. E. Viola, L. Yerman, J. M.
Fowler, C. G. Arvidson and R. R. Brubaker, A Missense
Mutation Causes Aspartase deficiency in Yersinia pestis, Microbiology 154, 000-000 (2008).
· X. Liu, L. Hanson, P. Langan, and R. E. Viola, The Effect of Deuteration on
Protein Structure. A High Resolution Comparison of
Hydrogenous and Perdeuterated Haloalkane Dehalogenase, Acta Cryst D63, 1000-1008 (2007).
· J. F. Ohren, M. L. Kundracik, C. L. Borders, P. Edmiston, and R. E. Viola,
Subunit Asymmetry and Communication in Muscle Creatine Kinase, Acta Cryst. D63,
381-389 (2007).
· Q. Liu, J. R. Kirchhoff, C.
R. Faehnle, R. E. Viola, and R. A. Hudson, A Rapid Method for the
Purification of Methanol Dehydrogenase from Methylobacterium
extorquens, Prot. Express. Purif.
46, 316-320 (2006).
· E. Cama,
S. Pethe, J.-L.
Boucher, S. Han, F. A. Emig, D. E. Ash, R. E.
Viola, D. Mansuy, and D. W. Christianson,
Inhibitor Coordination Interactions in the Binuclear Manganese Cluster of Arginase, Biochemistry 43, 8987-8999 (2004).
· S. Han, R. A. Moore, and R. E.
Viola, Synthesis and Evaluation of Alternative Substrates for Arginase, Bioorg. Chem. 30, 81-94 (2002).
· S. Han and R. E. Viola, A Spectrophotometric
Assay of Arginase, Anal. Biochem. 295, 117-119 (2001).
· R. E. Viola, “L-Aspartase: New Tricks from an Old Enzyme”,
in Adv. Enzymol., Mechanism of Enzyme Action,
Part B, (D. Purich, ed.), 2000, vol. 74B, ch. 7, pp. 295-341, Academic Press, San Diego, CA.
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